The detailed information of tRNA gene sequence


Sequence ID>C11116878
Genome IDCP002546
Search identical group
Phylum/ClassPlanctomycetota
SpeciesRubinisphaera brasiliensis DSM 5305 [CP002546]
Start position on genome 1247764
End posion on genome 1247838
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccggacttc
tRNA gene sequence 
GGGGCTATAGCTCAATCGGTTAGAGCAGCGGACTCATAATCCGTTGGTTCTGGGTTCGAG
TCCCAGTGGCCCCACtt
Downstream region at tRNA end position 
tttcgctgcc
Secondary structure (Cloverleaf model)
>C11116878	Met	CAT
                   c      ACtt tttcgctgcc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T          T G
                    T     G A C C C     A
      T A A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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