The detailed information of tRNA gene sequence


Sequence ID>C11116901
Genome IDCP002546
Search identical group
Phylum/ClassPlanctomycetota
SpeciesRubinisphaera brasiliensis DSM 5305 [CP002546]
Start position on genome 3459040
End posion on genome 3458965
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaaacaacac
tRNA gene sequence 
GGTGCGGTAGCCAAGTGGCCTAAGGCGATGGATTGCAAATCCATTATTTCGTGGGTTCGA
ATCCCACTCGCACCTCtt
Downstream region at tRNA end position 
agcctcgaac
Secondary structure (Cloverleaf model)
>C11116901	Cys	GCA
                   c      TCtt agcctcgaac
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       A C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C T A        G     TATTTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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