The detailed information of tRNA gene sequence


Sequence ID>C11116910
Genome IDCP002546
Search identical group
Phylum/ClassPlanctomycetota
SpeciesRubinisphaera brasiliensis DSM 5305 [CP002546]
Start position on genome 2005222
End posion on genome 2005133
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggaaatgccc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGCCGAAAGCGCTGGATTGCTAATCCAGTATGTCCCGAAAGGGG
CATCACGGGTTCGAATCCCGTTCTCTCCGCtt
Downstream region at tRNA end position 
ccaaccgccc
Secondary structure (Cloverleaf model)
>C11116910	Ser	GCT
                   c      GCtt ccaaccgccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A C G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TATGTCCCGAAAGGGGCATC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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