The detailed information of tRNA gene sequence


Sequence ID>W1511108003
Genome IDJJML01000019
Search identical group
Phylum/ClassCyanobacteriota
SpeciesNeosynechococcus sphagnicola sy1 CAUP A 1101 [JJML]
Start position on genome 28385
End posion on genome 28461
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaagccga
tRNA gene sequence 
CGCGGGGTAGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCCATGGTTCAAA
TCCATGCCCCGCCACCA
Downstream region at tRNA end position 
ctcaaaaaat
Secondary structure (Cloverleaf model)
>W1511108003	Met	CAT
                   a      ACCA ctcaaaaaat
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T A C C     A
      T G A        A      | | | | |     A
    C       C G A G       C A T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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