The detailed information of tRNA gene sequence


Sequence ID>W1511108020
Genome IDJJML01000044
Search identical group
Phylum/ClassCyanobacteriota
SpeciesNeosynechococcus sphagnicola sy1 CAUP A 1101 [JJML]
Start position on genome 5285
End posion on genome 5213
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgacataga
tRNA gene sequence 
CGAGGGTTGGCCGAGCGGTTTAGGCAGCGAACTCATAATTCGCCTCAGGCAGGTTCGACC
CCTGCACCCTCGAtgg
Downstream region at tRNA end position 
ttcttcaact
Secondary structure (Cloverleaf model)
>W1511108020	Met	CAT
                   a      Atgg ttcttcaact
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          C C
                    T     C G T C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T          A     CTCAG
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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