The detailed information of tRNA gene sequence


Sequence ID>W1511185626
Genome IDJMED01000504
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSmithella sp. SC_K08D17 [JMED]
Start position on genome 3814
End posion on genome 3899
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaataaat
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCGATGGCGGCGGTCTTGAAAACCGTTGGATGAAAGTCTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gaaaattaga
Secondary structure (Cloverleaf model)
>W1511185626	Ser	TGA
                   t      GCCA gaaaattaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TGGATGAAAGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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