The detailed information of tRNA gene sequence


Sequence ID>C11117107
Genome IDCP002511
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter sp. IMCC9063 [CP002511]
Start position on genome 550510
End posion on genome 550599
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttacttat
tRNA gene sequence 
GGAGAGATGTGAGAGTGGTTTAATCAGCACGCTTGGAAAGTGTGTAAACTGTCAAAAGTT
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taaatataaa
Secondary structure (Cloverleaf model)
>C11117107	Ser	GGA
                   t      GCCA taaatataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A G T       G A G G G     C
    G         | | |                 T T
    T       A T C A
      T T A        G     TAAACTGTCAAAAGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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