The detailed information of tRNA gene sequence


Sequence ID>C11117116
Genome IDCP002511
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter sp. IMCC9063 [CP002511]
Start position on genome 980839
End posion on genome 980930
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aactcaatgc
tRNA gene sequence 
GGTTAGGTGGGTGAGAGGCTGAAACCAGTCGTTTGCTAAATGACCTTACGAGTAACATCG
TAACGAGGGTTCGAATCCCTCCCTGACCGCCA
Downstream region at tRNA end position 
ctttttatga
Secondary structure (Cloverleaf model)
>C11117116	Ser	GCT
                   c      GCCA ctttttatga
                     G - C
                     G - C
                     T - A
                     T + G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CTTACGAGTAACATCGTAAC
                    G - C
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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