The detailed information of tRNA gene sequence


Sequence ID>C11117123
Genome IDCP002511
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter sp. IMCC9063 [CP002511]
Start position on genome 1096393
End posion on genome 1096318
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aatttaaaaa
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGAGGGTCGGGAGTTCGAGT
CTCTCATCGCCCACCA
Downstream region at tRNA end position 
acattcgggg
Secondary structure (Cloverleaf model)
>C11117123	Val	TAC
                   a      ACCA acattcgggg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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