The detailed information of tRNA gene sequence


Sequence ID>C11117126
Genome IDCP002511
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter sp. IMCC9063 [CP002511]
Start position on genome 1092149
End posion on genome 1092074
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aactctacaa
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTAGAGCGCCGGTCTCCAAAACCGGAGGCTGTGGGTTCAAGT
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
gatttgagat
Secondary structure (Cloverleaf model)
>C11117126	Trp	CCA
                   a      GCCA gatttgagat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      |   | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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