The detailed information of tRNA gene sequence


Sequence ID>C11117320
Genome IDAP012203
Search identical group
Phylum/ClassBacteroidota
SpeciesPorphyromonas gingivalis TDC60 [AP012203]
Start position on genome 1703636
End posion on genome 1703549
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtgtactac
tRNA gene sequence 
GGAAGTGTGGGTGAGTGGCTGAAACCAACAGTTTGCTAAACTGTCGTACGGGCAACTGTA
CCACGAGTTCGAATCTCGTCGCTTCCGCat
Downstream region at tRNA end position 
cagagagaga
Secondary structure (Cloverleaf model)
>C11117320	Ser	GCT
                   c      GCat cagagagaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T G C T C     A
      T G A        G      | | | | |     G
    G       G T G G       A C G A G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGCAACTGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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