The detailed information of tRNA gene sequence


Sequence ID>W1511248053
Genome IDJNUP01000066
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaeta lutea JC230 [JNUP]
Start position on genome 178416
End posion on genome 178491
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgacgacttt
tRNA gene sequence 
CGGGATGTTGCCTAGTGGCTAAGGCGCCTGCTTTGGGAGCAGGAGATCGGGGGTTCGAAT
CCCTCCATCCCGACGA
Downstream region at tRNA end position 
ttccgccagc
Secondary structure (Cloverleaf model)
>W1511248053	Pro	TGG
                   t      ACGA ttccgccagc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        T      | + | | |     G
    G       T C C G       G G G G G     C
    G       | | | |                 T T
    C       A G G C
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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