The detailed information of tRNA gene sequence


Sequence ID>C11117378
Genome IDCP002620
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas mendocina NK-01 [CP002620]
Start position on genome 4710205
End posion on genome 4710130
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attttgttct
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGACCTGCCA
Downstream region at tRNA end position 
ttttctaacg
Secondary structure (Cloverleaf model)
>C11117378	Trp	CCA
                   t      GCCA ttttctaacg
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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