The detailed information of tRNA gene sequence


Sequence ID>W11116243
Genome IDADFP01000046
Search identical group
Phylum/ClassSynergistota
SpeciesPyramidobacter piscolens W5455 [ADFP]
Start position on genome 5006
End posion on genome 5082
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggcgcatgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCGAA
TCCTCTCCCCGCAACCA
Downstream region at tRNA end position 
atttaaggcg
Secondary structure (Cloverleaf model)
>W11116243	Met	CAT
                   t      ACCA atttaaggcg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     G
    C       C G A G       A G A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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