The detailed information of tRNA gene sequence


Sequence ID>W11116249
Genome IDADFP01000051
Search identical group
Phylum/ClassSynergistota
SpeciesPyramidobacter piscolens W5455 [ADFP]
Start position on genome 5438
End posion on genome 5349
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gattgaggac
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCCGAAGGCGCACGCCTGCTAAGTGTGTAACCCGGTTTCGGGT
TCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tcttaaaaat
Secondary structure (Cloverleaf model)
>W11116249	Ser	GCT
                   c      GCCA tcttaaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TAACCCGGTTTCGGGTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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