The detailed information of tRNA gene sequence


Sequence ID>C11117740
Genome IDCP002345
Search identical group
Phylum/ClassBacteroidota
SpeciesPaludibacter propionicigenes WB4 [CP002345]
Start position on genome 1840032
End posion on genome 1840122
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaaaaatac
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACCCCTAAAGGGT
ATCGAGAGTTCGAATCTCTTCCTCTCCGCAA
Downstream region at tRNA end position 
atgttattta
Secondary structure (Cloverleaf model)
>C11117740	Ser	GGA
                   c      GCAA atgttattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C T C       G A G A G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACCCCTAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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