The detailed information of tRNA gene sequence


Sequence ID>C11117918
Genome IDCP002545
Search identical group
Phylum/ClassBacteroidota
SpeciesPseudopedobacter saltans DSM 12145 [CP002545]
Start position on genome 3970834
End posion on genome 3970759
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaatatag
tRNA gene sequence 
TGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATCAGTTCGAGT
CTGGTCCCCGCTACCT
Downstream region at tRNA end position 
aaggatttga
Secondary structure (Cloverleaf model)
>C11117918	Met	CAT
                   g      ACCT aaggatttga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G G T C     A
      T G A        G      | + | | |     G
    T       C G A G       A T C A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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