The detailed information of tRNA gene sequence


Sequence ID>W1511318924
Genome IDJPYW01000038
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAcidicaldus organivorans DX-1 [JPYW]
Start position on genome 8405
End posion on genome 8313
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggagggcat
tRNA gene sequence 
GGAGGGGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGGGGTAAACCC
GTATCGGGGGTTCGAATCCCCCCCCCTCCGCCA
Downstream region at tRNA end position 
cgtgatgggc
Secondary structure (Cloverleaf model)
>W1511318924	Ser	GCT
                   t      GCCA cgtgatgggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGGTAAACCCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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