The detailed information of tRNA gene sequence


Sequence ID>W1511319559
Genome IDJPZI01000004
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAggregatibacter actinomycetemcomitans RhAA1 RHAA1 [JPZI]
Start position on genome 66601
End posion on genome 66695
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttccaaga
tRNA gene sequence 
GGAAGATCGTCGTTTCCGGTGAGGCGGCAGGACTTCAAATCCTGTTGAGGCTGCCAGCAG
TCTCGGGTAGGTTCAACTCCTACGATCTTCCGCCA
Downstream region at tRNA end position 
gtaattttaa
Secondary structure (Cloverleaf model)
>W1511319559	SeC	TCA
                   a      GCCA gtaattttaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     C A T C C     A
      C C T        T      | | | | |     A
    G       T T G C       G T A G G     C
    G       + + | |                 T T
    T       G G C G
      G A          G     TTGAGGCTGCCAGCAGTCTCGG
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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