The detailed information of tRNA gene sequence


Sequence ID>C11118690
Genome IDCP003029
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus SG0.5JP17-172 [CP003029]
Start position on genome 63367
End posion on genome 63456
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acgcttcttc
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTTGAATGCACCGGTCTTGAAAACCGGCGTGCCCTCACGGGCA
CCGTGGGTTCGAATCCCACCCCCTCCGCAA
Downstream region at tRNA end position 
cccggccgcc
Secondary structure (Cloverleaf model)
>C11118690	Ser	TGA
                   c      GCAA cccggccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGTGCCCTCACGGGCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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