The detailed information of tRNA gene sequence


Sequence ID>C11118713
Genome IDCP003029
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus SG0.5JP17-172 [CP003029]
Start position on genome 2579240
End posion on genome 2579318
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccttgcctgT
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCCGGTTCAAA
TCCGGCCGCCCCGACCC
Downstream region at tRNA end position 
Aagaaggccg
Secondary structure (Cloverleaf model)
>C11118713	Pro	CGG
                   T      ACCC Aagaaggccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | | | |     A
    C       C G C G       G C C G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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