The detailed information of tRNA gene sequence


Sequence ID>C11118725
Genome IDCP003029
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus SG0.5JP17-172 [CP003029]
Start position on genome 793820
End posion on genome 793745
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggctcaacac
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCGAAT
CCCGCCCCCGCTACTA
Downstream region at tRNA end position 
cgaaggcgcc
Secondary structure (Cloverleaf model)
>C11118725	Met	CAT
                   c      ACTA cgaaggcgcc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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