The detailed information of tRNA gene sequence


Sequence ID>C11118835
Genome IDCP003046
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodospirillum rubrum F11 [CP003046]
Start position on genome 1998244
End posion on genome 1998333
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccggtaagcc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGGGAGCAATCTCA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
aatccccgcc
Secondary structure (Cloverleaf model)
>C11118835	Ser	TGA
                   c      GCCA aatccccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGAGCAATCTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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