The detailed information of tRNA gene sequence


Sequence ID>W1511359443
Genome IDJRYO01000033
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Scalindua brodae [JRYO]
Start position on genome 58057
End posion on genome 57969
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttattaaagT
tRNA gene sequence 
GGAGGGATGGCTGAGCGGTTGAAAGCGCTGGTTTCGAAAACCAGTTGGGGAGAAATCTTC
ACGCGAGTTCGAATCTCGCTCCCTCCGTtt
Downstream region at tRNA end position 
tagtatggag
Secondary structure (Cloverleaf model)
>W1511359443	Ser	CGA
                   T      GTtt tagtatggag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G T C G       G C G A G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TTGGGGAGAAATCTTCAC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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