The detailed information of tRNA gene sequence


Sequence ID>W1511360600
Genome IDJSAN01000057
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila amoebophila EI2 [JSAN]
Start position on genome 10453
End posion on genome 10378
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acttgcaaaT
tRNA gene sequence 
GCGGGAGTAGTTCAATTGGTTAGAGCACCGGCTTGTCACGCCGGAAGTTGCGGGTTCGAG
TCCCGTCTCCCGCGTtc
Downstream region at tRNA end position 
tatttttaag
Secondary structure (Cloverleaf model)
>W1511360600	Asp	GTC
                   T      GTtc tatttttaag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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