The detailed information of tRNA gene sequence


Sequence ID>W1511360601
Genome IDJSAN01000060
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila amoebophila EI2 [JSAN]
Start position on genome 26212
End posion on genome 26284
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgcatctga
tRNA gene sequence 
CGCGGGGTGGAGCAGGGGTTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAAT
CCTTCCCCCGCTAatt
Downstream region at tRNA end position 
tttctttacg
Secondary structure (Cloverleaf model)
>W1511360601	Met	CAT
                   a      Aatt tttctttacg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      G G A        G      | + | | |     G
    G       C G A G       G G A G G     C
    G       | | | |                 T T
    T       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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