The detailed information of tRNA gene sequence


Sequence ID>W1511360611
Genome IDJSAN01000128
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila amoebophila EI2 [JSAN]
Start position on genome 15256
End posion on genome 15347
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgcttcttT
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGCTTAAGGAGCACGCTTGGAAAGCGTGTGTACGTTAAACACGT
ACCGTGGGTTCGAATCCCACCTTCTCCGACA
Downstream region at tRNA end position 
cttgggatga
Secondary structure (Cloverleaf model)
>W1511360611	Ser	GGA
                   T      GACA cttgggatga
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTACGTTAAACACGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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