The detailed information of tRNA gene sequence


Sequence ID>W1511360613
Genome IDJSAN01000133
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila amoebophila EI2 [JSAN]
Start position on genome 45884
End posion on genome 45806
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttttttaccT
tRNA gene sequence 
GGCCCCATCGTCTAGCCAGGTCTAGGACACCGGATTTTCATTCCGATAACAGGGGTTCGA
ATCCCCTTGGGGTCATCA
Downstream region at tRNA end position 
agagtcttta
Secondary structure (Cloverleaf model)
>W1511360613	Glu	TTC
                   T      ATCA agagtcttta
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     G
  A         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     TAAC
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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