The detailed information of tRNA gene sequence


Sequence ID>W1511360616
Genome IDJSAN01000150
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila amoebophila EI2 [JSAN]
Start position on genome 12249
End posion on genome 12173
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aatcttttaT
tRNA gene sequence 
CTGGGTGTAGCGCAGCTTGGCTAACGCACTTGCATGGGGTGAAAGGGGGCGGAAGTTCAA
ATCTTCTCACCCAGATtc
Downstream region at tRNA end position 
tttttattcc
Secondary structure (Cloverleaf model)
>W1511360616	Pro	GGG
                   T      ATtc tttttattcc
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T T C     A
    T C G A        A      + | | | |     A
  T         C G C G       G G A A G     C
  G           | | |                 T T
  G         A C G C
    C T A          A     GGGGC
                    C - G
                    T - A
                    T - A
                    G   A
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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