The detailed information of tRNA gene sequence


Sequence ID>W1511364916
Genome IDJSDP01000252
Search identical group
Phylum/ClassCyanobacteriota
SpeciesAphanizomenon flos-aquae 2012/KM1/D3 [JSDP]
Start position on genome 13288
End posion on genome 13374
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaataatcT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGTCCGACTTGAAATCGGATGAAGTGAAAGCTTCC
GGGAGTTCGAATCTCCCCCTCTCCATtt
Downstream region at tRNA end position 
ttttgttttt
Secondary structure (Cloverleaf model)
>W1511364916	Ser	TGA
                   T      ATtt ttttgttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAAGTGAAAGCTTCC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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