The detailed information of tRNA gene sequence


Sequence ID>C11119693
Genome IDCP002868
Search identical group
Phylum/ClassSpirochaetota
SpeciesGracilinema caldarium DSM 7334 [CP002868]
Start position on genome 1376540
End posion on genome 1376464
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tctcgccatc
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGCTAGAGCGCCTCGCTTACACCGAGGATGTCGGGAGTTCGAG
TCTCTCAGCGCCCAACA
Downstream region at tRNA end position 
aaaagccgcc
Secondary structure (Cloverleaf model)
>C11119693	Val	TAC
                   c      AACA aaaagccgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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