The detailed information of tRNA gene sequence


Sequence ID>C11119701
Genome IDCP002868
Search identical group
Phylum/ClassSpirochaetota
SpeciesGracilinema caldarium DSM 7334 [CP002868]
Start position on genome 232931
End posion on genome 232843
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcacctttcT
tRNA gene sequence 
GGAGCGGTGTCCGAGCGGTTGAAGGAGGCGGTCTTGAAAACCGTTGAGCCTGCGAAGGTT
CCGGGGGTTCGAATCCCCCCTGCTCCGTtg
Downstream region at tRNA end position 
tccagaagag
Secondary structure (Cloverleaf model)
>C11119701	Ser	TGA
                   T      GTtg tccagaagag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGAGCCTGCGAAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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