The detailed information of tRNA gene sequence


Sequence ID>C11119704
Genome IDCP002868
Search identical group
Phylum/ClassSpirochaetota
SpeciesGracilinema caldarium DSM 7334 [CP002868]
Start position on genome 232629
End posion on genome 232542
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caggcatatt
tRNA gene sequence 
GGAGAGATGCGAGAGCGGTTGAATCGGACGGTCTCGAAAACCGTTGAACTCGTAAGGGTT
CCGAGGGTTCGAATCCCTCTCTCTCCGCag
Downstream region at tRNA end position 
gaatggccca
Secondary structure (Cloverleaf model)
>C11119704	Ser	CGA
                   t      GCag gaatggccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGAACTCGTAAGGGTTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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