The detailed information of tRNA gene sequence


Sequence ID>C11119705
Genome IDCP002868
Search identical group
Phylum/ClassSpirochaetota
SpeciesGracilinema caldarium DSM 7334 [CP002868]
Start position on genome 232322
End posion on genome 232233
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgacaaccT
tRNA gene sequence 
GGAGAGATGACCGAGCGGCCGAAGGTGCACGATTGGAAGTCGTGTGTACCCCTAAAGGGT
ACCGAGGGTTCAAATCCCTCTCTCTCCGTat
Downstream region at tRNA end position 
tccccaccat
Secondary structure (Cloverleaf model)
>C11119705	Ser	GGA
                   T      GTat tccccaccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACCCCTAAAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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