The detailed information of tRNA gene sequence


Sequence ID>C11119842
Genome IDCP002659
Search identical group
Phylum/ClassSpirochaetota
SpeciesParasphaerochaeta coccoides DSM 17374 [CP002659]
Start position on genome 2186256
End posion on genome 2186341
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtacctgact
tRNA gene sequence 
GGAGAGATGTCCGAGCGGTCGAAGGAGGCGGTCTTGAAAACCGCAGAGGCGCAAGCCTCC
GGGGGTTCGAATCCCTCTCTCTCCGCtt
Downstream region at tRNA end position 
tttttacaca
Secondary structure (Cloverleaf model)
>C11119842	Ser	TGA
                   t      GCtt tttttacaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     AGAGGCGCAAGCCTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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