The detailed information of tRNA gene sequence


Sequence ID>W1511386094
Genome IDJSTO01000008
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae 2012HC-11 [JSTO]
Start position on genome 320429
End posion on genome 320514
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gattttgcgT
tRNA gene sequence 
GCCCTGGTGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGACTTTCGAGTCGTG
CCGGTTCAAGTCCGGCCCGGGNNNNnn
Downstream region at tRNA end position 
nnnntccatt
Secondary structure (Cloverleaf model)
>W1511386094	Leu	TAA
                   T      NNnn nnnntccatt
                     G   N
                     C   N
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    C       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGACTTTCGAGTCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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