The detailed information of tRNA gene sequence


Sequence ID>W1511398560
Genome IDJTDR01000002
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas hydrothermalis MTCC 5445 [JTDR]
Start position on genome 216469
End posion on genome 216545
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacgcttttc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTAGGTTCAAG
TCCTACTGGGCCCACCA
Downstream region at tRNA end position 
tttctaattt
Secondary structure (Cloverleaf model)
>W1511398560	Met	CAT
                   c      ACCA tttctaattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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