The detailed information of tRNA gene sequence


Sequence ID>W1511402145
Genome IDJTJJ01000015
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPantoea rodasii ND03 [JTJJ]
Start position on genome 6277
End posion on genome 6183
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cttctttaaa
tRNA gene sequence 
GGAAGATCGTCGTCTCCGGTGAGGCGGCCGGATTTCAAATCCGGTTGGGGCCGCCAGCGG
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
cttccttatc
Secondary structure (Cloverleaf model)
>W1511402145	SeC	TCA
                   a      GCCA cttccttatc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G A          G     TTGGGGCCGCCAGCGGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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