The detailed information of tRNA gene sequence


Sequence ID>C11122327
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1298166
End posion on genome 1298260
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
accgcaacgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTCTGGCTGAAGGCGGGTGACTTGAAATCACCTGAGGGTCTAAACG
GCCCTCCGGGGGTTCAAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
gccagtgggc
Secondary structure (Cloverleaf model)
>C11122327	Ser	TGA
                   c      GCCA gccagtgggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     A
  T         G C C G       G G G G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        G     TGAGGGTCTAAACGGCCCTCC
                    G - C
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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