The detailed information of tRNA gene sequence


Sequence ID>C11122329
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1298354
End posion on genome 1298450
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttcttaagt
tRNA gene sequence 
GGAGAGGTGGCCGAGCCTGGCTGAAGGCGCCCGCCTGCTAAGCGGGTGTACGGGTTTAAA
GCCCGTACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
taccctccct
Secondary structure (Cloverleaf model)
>C11122329	Ser	GCT
                   t      GCCA taccctccct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  T         G C C G       G C G G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        G     TGTACGGGTTTAAAGCCCGTACC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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