The detailed information of tRNA gene sequence


Sequence ID>C11122332
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1500847
End posion on genome 1500923
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acttgtgcgt
tRNA gene sequence 
CGGGGCGTGGCGTAGCCTGGTAGCGCGCTGGCATGGGGGGCCAGAGGTCGCCCGTTCAAG
TCGGGTCGCCCCGACCA
Downstream region at tRNA end position 
ttttcttttt
Secondary structure (Cloverleaf model)
>C11122332	Pro	GGG
                   t      ACCA ttttcttttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G G G C     A
      C G A        G      + | | | |     A
    C       T G C G       G C C C G     C
    T       + | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  A       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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