The detailed information of tRNA gene sequence


Sequence ID>C11122336
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1606265
End posion on genome 1606340
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caagaagtgt
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGCGGTCGCCGGTTCAAGT
CCGGCCGTCTCCACCA
Downstream region at tRNA end position 
ttaattccct
Secondary structure (Cloverleaf model)
>C11122336	Ala	TGC
                   t      ACCA ttaattccct
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C G G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     CGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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