The detailed information of tRNA gene sequence


Sequence ID>C11122339
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1636959
End posion on genome 1637054
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgccgatagc
tRNA gene sequence 
GGAGAGGTGGCCGAGCCCGGCTTAAGGCGCCCGACTCGAAATCGGGTGTGGGGGCAAACA
CCCCCACCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ccttaacccc
Secondary structure (Cloverleaf model)
>C11122339	Ser	CGA
                   c      GCCA ccttaacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     A
  C         G C C G       G C G G G     C
  G           | | |                 T T
  G         A G G C
    C T T A        G     TGTGGGGGCAAACACCCCCACC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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