The detailed information of tRNA gene sequence


Sequence ID>C11122346
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1552728
End posion on genome 1552653
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcctgcaggt
tRNA gene sequence 
AGGCCAGTAGCCCAATTGGTAGGGCTCCGGACTCCAAATCCGGCGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttttatttat
Secondary structure (Cloverleaf model)
>C11122346	Trp	CCA
                   t      GCCA ttttatttat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C C C G       G G G G G     C
    G       | | | |                 T T
    G       G G G C
      T A          T     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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