The detailed information of tRNA gene sequence


Sequence ID>C11122347
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1406531
End posion on genome 1406437
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attttctcct
tRNA gene sequence 
GGAGGCGGACGGGGGCTGGTGTCCCCCCCGGACTTCAAATCCGGTGGCCCCGCTTGGAGC
GGGGTGGTGGGTTCGATTCCCATCCGCCTCCGCCA
Downstream region at tRNA end position 
tattttgctt
Secondary structure (Cloverleaf model)
>C11122347	SeC	TCA
                   t      GCCA tattttgctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    A     T A C C C     A
      T C G        C      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | | |                 T T
    T       C C C C
      G T          C     TGGCCCCGCTTGGAGCGGGGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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