The detailed information of tRNA gene sequence


Sequence ID>C11122355
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 663101
End posion on genome 663024
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccacttaagc
tRNA gene sequence 
GTCCCCATCGTCTAGCCCGGCCTAGGACACCGGCCTTTCACGCCGGCGACGGGGGTTCGA
ATCCCCCTGGGGACGCCA
Downstream region at tRNA end position 
ctcaacaagt
Secondary structure (Cloverleaf model)
>C11122355	Glu	TTC
                   c      GCCA ctcaacaagt
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C C C C C     A
    C C G A        C      | | | | |     G
  C         T C T G       G G G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        A     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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