The detailed information of tRNA gene sequence


Sequence ID>C11122357
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 662915
End posion on genome 662839
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctcaaacgt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCATCCGGCTCATAACCGGACGGTCGGAGGTTCGAG
TCCTCCCAGGCCCACCA
Downstream region at tRNA end position 
ccttttagaa
Secondary structure (Cloverleaf model)
>C11122357	Met	CAT
                   t      ACCA ccttttagaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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