The detailed information of tRNA gene sequence


Sequence ID>C11122358
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 289204
End posion on genome 289128
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cacagtgagt
tRNA gene sequence 
GCCGGCTTAGCTCAGCTGGCTAGAGCGGGTGACTTGTAATCACCAGGTCGGGGGTTCGAC
TCCCTCAGCCGGCACCA
Downstream region at tRNA end position 
gagtggaggg
Secondary structure (Cloverleaf model)
>C11122358	Thr	TGT
                   t      ACCA gagtggaggg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T C
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    G - C
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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