The detailed information of tRNA gene sequence


Sequence ID>C11122359
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 289123
End posion on genome 289038
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gcaccagagt
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCAAAGGCAGCGGACTGTAAATCCGCCGGCGTAAGCCTACGC
AGGTTCGAATCCTGCCCCCTCCACCA
Downstream region at tRNA end position 
ctgacgcggg
Secondary structure (Cloverleaf model)
>C11122359	Tyr	GTA
                   t      ACCA ctgacgcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      C A A        A     CGGCGTAAGCCTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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