The detailed information of tRNA gene sequence


Sequence ID>C11122360
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 289033
End posion on genome 288957
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaccactga
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGCGGGTTCAAA
TCCCGCCCCCGCAACCA
Downstream region at tRNA end position 
atgagcgggc
Secondary structure (Cloverleaf model)
>C11122360	Met	CAT
                   a      ACCA atgagcgggc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        A      | | | | |     A
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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